Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATGGGGGTGCCAGGTG
(((((((((...((((......&))))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001280552
GeneSymbolPAX5
Binding site2651,2669
Score0.846
Seed1
Au0.485
Energy-19.3
Binding len18
Me-11.352
Phylopstem0.10236199999999998
Phylopflank0.1209452
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure