Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCCGCCACTGCC
..((((..((((((((.((((&))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001280552
GeneSymbolPAX5
Binding site1190,1209
Score0.846
Seed0
Au0.279
Energy-24.2
Binding len19
Me-8.814
Phylopstem-0.39030126249999997
Phylopflank0.36614621625000005
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure