Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGCAACACAAGGAGAAAATGCAGCTGCT
..((((((((((((((.(((.&)))..)))))............))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001280552
GeneSymbolPAX5
Binding site6645,6677
Score0.923
Seed1
Au0.574
Energy-22.6
Binding len32
Me-4.957
Phylopstem0.27253078076923076
Phylopflank0.24171931499999993
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure