Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAAGGCCAGGACCATGCAGGGA
...(((((((((((((((...&))))))))........))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001280554
GeneSymbolPAX5
Binding site3279,3303
Score0.846
Seed0
Au0.382
Energy-28.5
Binding len24
Me-6.515
Phylopstem-0.35372894782608694
Phylopflank-0.2961792875
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure