Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGACATCGGGAGCAGTGTGCCAGGC
.((((((((((..(((......&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001280555
GeneSymbolPAX5
Binding site895,924
Score1.0
Seed1
Au0.338
Energy-19.7
Binding len15
Me-8.429
Phylopstem0.18322759999999993
Phylopflank0.30578026499999994
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure