Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGCAACACAAGGAGAAAATGCAGCTGCT
..((((((((((((((.(((.&)))..)))))............))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001280555
GeneSymbolPAX5
Binding site6534,6566
Score0.923
Seed1
Au0.574
Energy-22.6
Binding len32
Me-4.957
Phylopstem0.03951758846153847
Phylopflank0.5373376612499998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure