Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGACATCGGGAGCAGTGTGCCAGGC
.((((((((((..(((......&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001280556
GeneSymbolPAX5
Binding site927,956
Score1.0
Seed1
Au0.324
Energy-19.7
Binding len15
Me-8.429
Phylopstem-0.37978296
Phylopflank-0.16258694750000002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure