Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATTTTGACATGGGGGTGCCAGGTG
(((((((((...((((......&.))))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001280556
GeneSymbolPAX5
Binding site2667,2692
Score0.923
Seed1
Au0.485
Energy-19.7
Binding len19
Me-11.352
Phylopstem-0.23551166666666667
Phylopflank0.3625251500000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure