Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGCAACACAAGGAGAAAATGCAGCTGCT
..((((((((((((((.(((.&)))..)))))............))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001280556
GeneSymbolPAX5
Binding site6668,6700
Score0.923
Seed1
Au0.574
Energy-22.6
Binding len32
Me-4.957
Phylopstem0.1939236653846154
Phylopflank0.11033358499999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure