Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCTTCCCTCCCAGTCCCAGCCCTGCTTCCGGCTGCGAA
(((((((..(((..(((.(((&.))).)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281304
GeneSymbolFKBP6
Binding site1442,1485
Score1.0
Seed1
Au0.412
Energy-21.3
Binding len21
Me-9.454
Phylopstem0.5983259714285714
Phylopflank0.357197602625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure