Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGGGGTTGCAGCTGCAC
.(((((((((((((.(.(((.&)))..).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281428
GeneSymbolDNAI1
Binding site1674,1695
Score0.846
Seed1
Au0.397
Energy-22.0
Binding len21
Me-4.529
Phylopstem3.580032153846154
Phylopflank3.1732398070000007
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure