Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCTGCGGGCCTCCGAAGTGCGGCAGCTGCT
..((((((((.((....((((&.)))).......)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281429
GeneSymbolPCED1B
Binding site250,283
Score0.923
Seed1
Au0.412
Energy-22.2
Binding len24
Me-9.607
Phylopstem0.8346144875000001
Phylopflank0.9538843650000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure