Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGATGACTGTGGCAGCTGCAT
.(((((((((((((((.((((&)))).))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281432
GeneSymbolZNHIT3
Binding site1794,1818
Score0.846
Seed1
Au0.471
Energy-22.7
Binding len24
Me-3.793
Phylopstem2.0416021333333334
Phylopflank1.8665007006249994
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure