Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGACCACAGCAAGCC
..((.((((.(((((.(((((&)))))))))).))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281435
GeneSymbolMAP2K4
Binding site3122,3142
Score1.0
Seed0
Au0.456
Energy-20.9
Binding len20
Me-10.552
Phylopstem0.7702504
Phylopflank0.8011255037500002
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure