Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTCTGCACCAGCAGCTGCAAC
((((((((((((.(((((((.&.))).)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281439
GeneSymbolSMAP1
Binding site854,878
Score0.923
Seed1
Au0.412
Energy-26.9
Binding len23
Me-5.227
Phylopstem2.018101076923077
Phylopflank3.118756079425
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure