Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACTTACAGCTGAAAAGCTGCAGA
((((((((.((((((((((((&)))..)))))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281440
GeneSymbolSMAP1
Binding site626,652
Score0.923
Seed1
Au0.574
Energy-23.8
Binding len26
Me-4.994
Phylopstem1.6236812857142857
Phylopflank3.3660520500000004
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure