Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCACAAGCACCAGCTGCAT
.((((((((.(.((((.((((&)))).)))).)..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281440
GeneSymbolSMAP1
Binding site1062,1084
Score0.923
Seed1
Au0.5
Energy-23.0
Binding len22
Me-8.383
Phylopstem1.7224937125
Phylopflank3.9580240749999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure