Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGGGACCGCGTCATGATTGAGCAAGAATGCTGTG
..((((((((((((.((((((&)))).)).)))))))..................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281443
GeneSymbolUPK1A
Binding site468,507
Score0.846
Seed1
Au0.426
Energy-20.5
Binding len39
Me-5.692
Phylopstem3.6295770733333326
Phylopflank2.3114221687499996
Longest consecutive pairings7
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure