Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGCCTGCAGGACAGATCAGAGATGCAGCTGCAGA
((((((((((((((.(.((((&.))))..).)))..........))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281449
GeneSymbolRBPJL
Binding site135,174
Score0.923
Seed1
Au0.338
Energy-22.8
Binding len34
Me-4.673
Phylopstem0.8103200374999999
Phylopflank1.16069743
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure