Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGATGCCGAGCTGCGC
.(((((((.((((....((((&))))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281451
GeneSymbolTRIM50
Binding site265,285
Score1.0
Seed1
Au0.279
Energy-22.4
Binding len20
Me-6.675
Phylopstem-0.4412507142857143
Phylopflank-0.32981760249999986
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure