Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGTCTACAGCCGCATGAAGGAGGAGCTCGCAGC
(((((((((((((((((.(((&)))...))))))))))..........))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281451
GeneSymbolTRIM50
Binding site507,542
Score0.846
Seed1
Au0.397
Energy-22.3
Binding len35
Me-3.938
Phylopstem2.0801873214285718
Phylopflank1.9872763999999996
Longest consecutive pairings10
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure