Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGAACAGCCGCGGCA
.....(((((((((((..(((&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281453
GeneSymbolMBD3
Binding site111,129
Score0.846
Seed0
Au0.147
Energy-23.9
Binding len18
Me-13.666
Phylopstem0.20435367545454544
Phylopflank0.14993238387499996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure