Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCAGCAAGCCGCAGCTGG
...(((((((((((((..((.&))...)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281453
GeneSymbolMBD3
Binding site362,382
Score0.923
Seed0
Au0.294
Energy-23.8
Binding len20
Me-6.515
Phylopstem0.14412542857142857
Phylopflank-0.23114293249999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure