Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCAGCAAGCCGCAGCTGG
...(((((((((((((..((.&))...)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281454
GeneSymbolMBD3
Binding site266,286
Score0.846
Seed0
Au0.294
Energy-23.8
Binding len20
Me-6.515
Phylopstem-0.682033
Phylopflank-0.004345425000000014
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure