Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGAGAGCAGCCGCCAGCAGCGAA
((((.(((((((((((.....&.)))))))).))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281463
GeneSymbolSMC1A
Binding site1745,1772
Score0.846
Seed0
Au0.382
Energy-22.5
Binding len19
Me-8.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure