Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAGCTGCAGCTC
....(((((((((((((....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281463
GeneSymbolSMC1A
Binding site935,949
Score1.0
Seed0
Au0.559
Energy-21.6
Binding len14
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure