Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAAAATATATGCCTCTGATGAAGGACGAGTCCAGATGACTGCAGCTGCT
..((((((((((((((..((.&.))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281471
GeneSymbolPPIP5K2
Binding site2147,2200
Score0.923
Seed1
Au0.485
Energy-26.8
Binding len20
Me-4.957
Phylopstem5.675173450000001
Phylopflank5.666956612499996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure