Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTGAAGCTGTAC
.(((((((.((((...(((((&))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281476
GeneSymbolFASTKD1
Binding site188,206
Score0.846
Seed1
Au0.529
Energy-17.9
Binding len18
Me-6.675
Phylopstem-0.4208189285714286
Phylopflank0.057979970250000026
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
Position5UTR
2D Structure