Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAACGGAGGGCTGCGGA
((((((((.(.((((..((((&)))))))).)..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281492
GeneSymbolMSH6
Binding site300,321
Score0.846
Seed1
Au0.426
Energy-19.7
Binding len21
Me-8.052
Phylopstem0.531974875
Phylopflank0.365358235
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure