Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGCTAACAGTTTACCCTGCCCTGGGGGCTGCAGCTGCGAC
((((((((((((((.(.(((.&.))).).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281503
GeneSymbolSLITRK1
Binding site1524,1568
Score1.0
Seed1
Au0.426
Energy-28.9
Binding len22
Me-4.673
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure