Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAATCCAGCTTTTATGGGTGTGCAAA
(((((((((.((((((((((.&)))))))))))))))...........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281522
GeneSymbolMCM8
Binding site5185,5216
Score0.846
Seed1
Au0.574
Energy-22.6
Binding len31
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure