Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCCCGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAG
((.((((((((.((((((((.&.)))))))).)..))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281717
GeneSymbolUBB
Binding site557,603
Score0.923
Seed0
Au0.471
Energy-22.8
Binding len24
Me-8.842
Phylopstem4.7757274999999995
Phylopflank5.709914312499998
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure