Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGCTACCGCGTTGCGT
.((((((.(((((.(((.(((&))).))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281725
GeneSymbolBTD
Binding site87,107
Score0.846
Seed1
Au0.485
Energy-20.4
Binding len20
Me-6.964
Phylopstem-1.4479798166666669
Phylopflank-1.0170899699999998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure