Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGCTCTTTTCCTCTGCGGCTGTT
..((((((((((..(((((.(&).))))).........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281725
GeneSymbolBTD
Binding site377,404
Score0.846
Seed1
Au0.397
Energy-19.4
Binding len27
Me-7.103
Phylopstem1.0020011
Phylopflank0.3440554207500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure