Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCACCAGCTAGCTGCAT
.(((((((((((((((.....&))))))....)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281726
GeneSymbolBTD
Binding site10956,10977
Score0.846
Seed1
Au0.426
Energy-20.4
Binding len21
Me-3.793
Phylopstem0.21840359499999992
Phylopflank0.025722816249999995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure