Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCGAAGATTCTTGAACCCACAGCAGCAGCTGCGGC
((((((((((.(((((..(((&.))).))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281730
GeneSymbolCST8
Binding site98,135
Score0.923
Seed1
Au0.368
Energy-25.6
Binding len22
Me-6.762
Phylopstem-0.3067977
Phylopflank-0.348576315
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure