Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATTGATGTAGAAATTGCCCGCAGCGATTGCAGA
((((((((((((..(((((((&)))))))...............)))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281730
GeneSymbolCST8
Binding site460,498
Score0.923
Seed1
Au0.574
Energy-21.9
Binding len38
Me-6.084
Phylopstem1.3307688933333333
Phylopflank0.6028995962499999
Longest consecutive pairings7
Position of longest consecutive pairings31
Pairings in 3prime end7
PositionCDS
2D Structure