Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTCAGAACCTCTTGTCCGAGGCTATACCACAGCTGCAGCTGTG
..((((((((((((((..(((&.))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281732
GeneSymbolSLC26A6
Binding site589,636
Score1.0
Seed1
Au0.471
Energy-26.7
Binding len19
Me-4.957
Phylopstem0.3434639000000001
Phylopflank0.7219758075000001
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure