Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTGCCTCAGCTGTGGG
(((((((((.(((..(((((.&))))).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281735
GeneSymbolZFYVE1
Binding site148,168
Score0.846
Seed1
Au0.515
Energy-21.4
Binding len20
Me-6.772
Phylopstem-0.6204044666666666
Phylopflank0.1852127375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure