Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAGGGCTCTCTGCAGCTGTT
..(((((((((((((((.(((&))).)))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281737
GeneSymbolETFDH
Binding site249,275
Score0.846
Seed1
Au0.456
Energy-22.5
Binding len26
Me-4.957
Phylopstem1.163902380952381
Phylopflank-0.25899413250000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure