Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTACAACTCTTCCAAGAGCAGCTGG
...(((((((((((((.(((.&))))))))).........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281747
GeneSymbolMLIP
Binding site2539,2565
Score0.923
Seed0
Au0.559
Energy-20.2
Binding len26
Me-6.515
Phylopstem2.0019978636363636
Phylopflank1.8040889488875003
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
PositionCDS
2D Structure