Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTACAGCCGCCCACGCTACAGCTGTT
..((((((((((((((.(((.&))))))))))).........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281749
GeneSymbolSIK3
Binding site1461,1488
Score0.846
Seed1
Au0.353
Energy-22.8
Binding len27
Me-4.957
Phylopstem0.12626436086956525
Phylopflank-0.031260122500000015
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end6
PositionCDS
2D Structure