Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGCTGCAGCA
.....((((((((((...(((&))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281768
GeneSymbolADCY1
Binding site51,66
Score0.846
Seed0
Au0.309
Energy-20.1
Binding len15
Me-13.899
Phylopstem4.2676596
Phylopflank1.36859642625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure