Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAAACTTCCGCGGCTGG
...(((((((((..((..(((&)))...))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281775
GeneSymbolZMYND8
Binding site2390,2410
Score0.846
Seed0
Au0.309
Energy-22.3
Binding len20
Me-8.661
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure