Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTCCTCCGCCTTGCTGCAAC
(((((((.((((..(.(((((&))))))..))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281786
GeneSymbolSHMT1
Binding site1888,1911
Score0.846
Seed1
Au0.456
Energy-20.7
Binding len23
Me-8.63
Phylopstem5.220914285714286
Phylopflank5.506899687499998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure