Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTCGCTCTGTTGCCAGGC
.(((((((.(((..((((((((&)))))).))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001281789
GeneSymbolCNEP1R1
Binding site1174,1196
Score0.846
Seed1
Au0.5
Energy-20.7
Binding len22
Me-6.996
Phylopstem0.18917431111111116
Phylopflank0.36552627625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure