Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACCCCTCTCGCAGCTGCT
..((((((((((..((.((((&))))))....).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281806
GeneSymbolFSD2
Binding site2329,2351
Score0.923
Seed1
Au0.426
Energy-22.1
Binding len22
Me-7.103
Phylopstem-0.033722927272727264
Phylopflank-0.06092431749999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure