Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCACCCGCTTCAACTGCCTGCAACCGCCGCTGA
...((((.((((((((.((((&.)))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281837
GeneSymbolGCSAML
Binding site28,64
Score0.923
Seed0
Au0.353
Energy-25.9
Binding len19
Me-8.828
Phylopstem-0.04435475
Phylopflank0.2061188565217391
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end7
Position5UTR
2D Structure