Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGTAGCTGTT
..(((((((((.....(((((&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001281838
GeneSymbolGCSAML
Binding site3027,3042
Score0.846
Seed1
Au0.75
Energy-16.3
Binding len15
Me-11.418
Phylopstem-0.11091915000000002
Phylopflank0.041561608125000024
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure