Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCACTGTGGCCAGGTC
(((((((.((((.(((......&))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001281956
GeneSymbolCSMD2
Binding site12245,12261
Score0.923
Seed1
Au0.441
Energy-18.4
Binding len16
Me-7.54
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure